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The reversed phase HPLC (RP-HPLC) analysis is carried out using an Agilent 1100 HPLC system coupled to a diode array detector equipped with an ET250/2 Nucleosil 120-5 C18 column (250 x 2.1 mm, 5 µm particle size; Macherey & Nagel). A binary gradient system is used: solvent A, methanol/water/acetic acid (80:20:0.1, v/v/v); solvent B, methanol/acetic acid (100:0.1, v/v/v) with the following gradient program: 100 % solvent A for 10 min, followed by a linear increase of solvent B up to 25 % within 18 min, a linear increase of solvent B up to 100 % within 2 min and an isocratic run at 100 % solvent B for 20 min. The flow rate is 0.18 ml/min.
Oxylipins are purified by collecting the respective fractions. The following authentic standards are used to determine the retention times of the different oxylipin classes: JA, SA, oPDA, 11-HHT, 13-HOT, 13-HOD, dinor-CnA, CA, and CnA. JA and SA are detected by monitoring the absorbance at 202 nm. For analysis of dinor-oPDA and oPDA, the absorbance at 224 nm is recorded. For detection of hydroperoxy fatty acids and hydroxy fatty acids, the absorbance of the conjugated diene system at 234 nm is recorded. For analysis of divinyl ethers, the absorbances at 250 nm and 268 nm indicating either one or two conjugated diene systems in conjugation to an ether bond of the fatty acids are recorded.

standards are available from Sigma (Germany) Larodan (Sweden), Cayman Chemical (USA), kindly provided by Mats Hamberg (Stockholm, Sweden) and Otto Miersch (Halle/Salle, Germany) or enzymatically synthesized, respectively

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Oxylipin Profiling Database All rights reserved 2004 - 2005 A. Schomburg, Plant Biochemistry, University of Goettingen